May: 366 papers in 2016

As one of my 2016 scientific resolutions I will be reading one paper every day of the year and posting each here (hopefully) daily. Along with me, Natalie Matosin, Martin Engel and Lauren Drogos will also be doing the same and likewise posting each paper on their respective blogs. You can also follow the three of us and the others who are joining us using the tag #366papers on twitter. Also find Dr Lauren Drogos here, Dr Natalie Matosin here and find Dr Martin Engel here.

May 1:

Letunic, Ivica, and Peer Bork. “Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation.Bioinformatics 23, no. 1 (2007): 127-128.

May 2:

Skiniotis, Georgios, Martin J. Boulanger, K. Christopher Garcia, and Thomas Walz. “Signaling conformations of the tall cytokine receptor gp130 when in complex with IL-6 and IL-6 receptor.” Nature structural & molecular biology 12, no. 6 (2005): 545-551.

May 3:

Cuff, James A., Michele E. Clamp, Asim S. Siddiqui, Matt Finlay, and Geoffrey J. Barton. “JPred: a consensus secondary structure prediction server.Bioinformatics 14, no. 10 (1998): 892-893.

May 4:

Ozaki, Katsutoshi, and Warren J. Leonard. “Cytokine and cytokine receptor pleiotropy and redundancy.Journal of Biological Chemistry 277, no. 33 (2002): 29355-29358.

May 5:

Cuff, James A., Michele E. Clamp, Asim S. Siddiqui, Matt Finlay, and Geoffrey J. Barton. “JPred: a consensus secondary structure prediction server.Bioinformatics 14, no. 10 (1998): 892-893.

May 6:

Lim, Megan SC, Margaret E. Hellard, and Campbell K. Aitken. “The case of the disappearing teaspoons: longitudinal cohort study of the displacement of teaspoons in an Australian research institute.BMJ 331, no. 7531 (2005): 1498-1500.

May 7: 

Jenkins, Misty R., and Gillian M. Griffiths. “The synapse and cytolytic machinery of cytotoxic T cells.Current opinion in immunology 22, no. 3 (2010): 308-313.

May 8:

Hilton, Douglas J., Stephanie S. Watowich, Luba Katz, and Harvey F. Lodish. “Saturation mutagenesis of the WSXWS motif of the erythropoietin receptor.” Journal of Biological Chemistry 271, no. 9 (1996): 4699-4708.

May 9:

Gargiulo, Gaetano, Michela Serresi, Matteo Cesaroni, Danielle Hulsman, and Maarten van Lohuizen. “In vivo shRNA screens in solid tumors.” Nature protocols 9, no. 12 (2014): 2880-2902.

May 10:

Simon, Michael A., David DL Bowtell, G. Steven Dodson, Todd R. Laverty, and Gerald M. Rubin. “Ras1 and a putative guanine nucleotide exchange factor perform crucial steps in signaling by the sevenless protein tyrosine kinase.Cell 67, no. 4 (1991): 701-716.

May 11:

Kile, Benjamin T., and Douglas J. Hilton. “The art and design of genetic screens: mouse.Nature Reviews Genetics 6, no. 7 (2005): 557-567.

May 12:

St Johnston, Daniel. “The art and design of genetic screens: Drosophila melanogaster.” Nature reviews genetics 3, no. 3 (2002): 176-188.

May 13:

Patton, E. Elizabeth, and Leonard I. Zon. “The art and design of genetic screens: zebrafish.Nature Reviews Genetics 2, no. 12 (2001): 956-966.

May 14:

Boutros, Michael, and Julie Ahringer. “The art and design of genetic screens: RNA interference.Nature Reviews Genetics 9, no. 7 (2008): 554-566.

May 15:

Kunst, Michael, Matthew CF Tso, D. Dipon Ghosh, Erik D. Herzog, and Michael N. Nitabach. “Rhythmic control of activity and sleep by class B1 GPCRs.Critical reviews in biochemistry and molecular biology 50, no. 1 (2015): 18-30.

May 16:

Grimm, Stefan. “The art and design of genetic screens: mammalian culture cells.” Nature Reviews Genetics 5, no. 3 (2004): 179-189.

may 17:

Forsburg, Susan L. “The art and design of genetic screens: yeast.” Nature Reviews Genetics 2, no. 9 (2001): 659-668.

May 18:

Goodwin, Sara, John D. McPherson, and W. Richard McCombie. “Coming of age: ten years of next-generation sequencing technologies.Nature Reviews Genetics 17, no. 6 (2016): 333-351.

May 19:

Zhang, Chunyan, Hong Xin, Wang Zhang, Paul J. Yazaki, Zhifang Zhang, Keith Le, Wenzhao Li et al. “CD5 Binds to Interleukin-6 and Induces a Feed-Forward Loop with the Transcription Factor STAT3 in B Cells to Promote Cancer.Immunity 44, no. 4 (2016): 913-923.

May 20:

Loman, Nick, and Mick Watson. “So you want to be a computational biologist?.” Nature biotechnology 31, no. 11 (2013): 996-998.

May 21:

Dranoff, Glenn. “Cytokines in cancer pathogenesis and cancer therapy.” Nature Reviews Cancer 4, no. 1 (2004): 11-22.

May 22:

Hilton, Douglas J., Rachael T. Richardson, Warren S. Alexander, Elizabeth M. Viney, Tracy A. Willson, Naomi S. Sprigg, Robyn Starr, Sandra E. Nicholson, Donald Metcalf, and Nicos A. Nicola. “Twenty proteins containing a C-terminal SOCS box form five structural classes.Proceedings of the National Academy of Sciences 95, no. 1 (1998): 114-119.

May 23:

Tjio, Joe Hin, and Theodore T. Puck. “Genetics of somatic mammalian cells: II. Chromosomal constitution of cells in tissue culture.” The Journal of experimental medicine 108, no. 2 (1958): 259.

May 24:

Kao, Fa‐Ten, and Theodore T. Puck. “Genetics of somatic mammalian cells. IX. Quantitation of mutagenesis by physical and chemical agents.” Journal of cellular physiology 74, no. 3 (1969): 245-257.

May 25:

Wang, Zimou, Weiliang Xu, Lei Liu, and Ting F. Zhu. “A synthetic molecular system capable of mirror-image genetic replication and transcription.” Nature Chemistry (2016).

May 26:

Paddison, Patrick J., and Gregory J. Hannon. “RNA interference: the new somatic cell genetics?.Cancer cell 2, no. 1 (2002): 17-23.

May 27:

Stankowski, Leon F., Kenneth R. Tindall, and Abraham W. Hsie. “Quantitative and molecular analyses of ethyl methanesulfonate-and ICR 191-induced mutation in AS52 cells.Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 160, no. 2 (1986): 133-147.

May 28:

Simpson, Richard J., Annet Hammacher, David K. Smith, Jacqueline M. Matthews, and Larry D. Ward. “Interleukin‐6: Structure‐function relationships.Protein Science 6, no. 5 (1997): 929-955.

May 29:

Paonessa, Giacomo, Rita Graziani, Anna De Serio, Rocco Savino, Laura Ciapponi, Armin Lahm, Anna Laura Salvati, Carlo Toniatti, and Gennaro Ciliberto. “Two distinct and independent sites on IL-6 trigger gp 130 dimer formation and signalling.” The EMBO Journal 14, no. 9 (1995): 1942.

May 30:

Hsin, Jing-Ping, Wencheng Li, Mainul Hoque, Bin Tian, and James L. Manley. “RNAP II CTD tyrosine 1 performs diverse functions in vertebrate cells.” ELife 3 (2014): e02112.

May 31:

Dobzhansky, Theodosius. “Nothing in biology makes sense except in the light of evolution.” The american biology teacher 75, no. 2 (2013): 87-91.





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